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2019/20 Taught Postgraduate Module Catalogue

MATH5820M Bayesian Statistics and Causality

15 creditsClass Size: 35

Module manager: Dr Peter Thwaites
Email: P.A.Thwaites@leeds.ac.uk

Taught: Semester 2 View Timetable

Year running 2019/20

Pre-requisite qualifications

MATH2715 or MATH2735

This module is mutually exclusive with

MATH3820Bayesian Statistics

This module is approved as an Elective

Module summary

Bayesian statistic methods have had a long and often controversial history; nevertheless, they are widely adopted due to their utility in solving complex inference problems. This module introduces the Bayesian approach to statistical inference and decision making. The module covers both philosophical and computational aspects of adopting a Bayesian approach. It also gives an insight into how causality can be rigorously handled and how this relates to statistical model building.

Objectives

Bayesian statistics has had a long and often controversial history. It gives us a rigorous framework in which to combine prior beliefs and expectations with observed data from many sources – a process that we all do informally. This framework also opens up many opportunities for analyses of complex problems that cannot be adequately handled using traditional statistical techniques. The objective of this module is to introduce Bayesian statistical methods through the consideration of philosophical differences with traditional statistical procedures and the application of Bayesian techniques. This module also introduces the idea of using Bayesian methods to support hypotheses of causality. By formalising causality within a Bayesian framework, we are able to begin to move away from analyses of association between variables and provide evidence that change in one variable causes a change in another.

Learning outcomes
On completion of this module, students should be able to:
(a) discuss the differences between Bayesian and traditional statistical methods;
(b) derive prior, posterior and predictive distributions for standard Bayesian models;
(c) tackle hierarchical analyses using sampling methods;
(d) define utility in the context of decision making and apply decision analysis methods to simple finite dimensional problems;
(e) produce network representations of joint distributions and provide extensions to causal Bayesian networks;
(f) explain the issues surrounding confounding within the context of causality;
(g) use a statistical package with real data to facilitate an appropriate analysis and write a report interpreting the results.


Syllabus

1. Degrees of belief and subjective probabilities,
2. The likelihood (choice, exchangeability and the likelihood principle),
3. Prior, posterior and predictive distributions in conjugate analyses,
4. Specification of prior distributions through elicitation and principles of ignorance,
5. Modelling complex problems with potentially disparate data sources using hierarchical techniques,6. Bayesian updating using sampling techniques including prior-sample reweighting and Gibbs sampling,
7. Network representations of joint probability distributions and their use in Bayesian updating,
8. Causality as oppose to association and the extension of networks to causal Bayesian networks,
9. Confounding issues in detecting causality including Simpson’s paradox,
10. Back-door and front-door criteria for controlling for confounding,
11. Quantitative decision analysis: minimax decisions to utility theory.

Teaching methods

Delivery typeNumberLength hoursStudent hours
Lecture331.0033.00
Practical12.002.00
Private study hours115.00
Total Contact hours35.00
Total hours (100hr per 10 credits)150.00

Private study

Reviewing lecture notes and wider reading: 60 hours;
Completing exercise sheets: 30 hours;
Completing assessed practical: 25 hours.

Opportunities for Formative Feedback

Exercise sheets provided throughout the semester covering various topics.

Methods of assessment


Coursework
Assessment typeNotes% of formal assessment
PracticalReport on Bayesian analysis20.00
Total percentage (Assessment Coursework)20.00

There is no resit available for the coursework component of this module. If the module is failed, the coursework mark will be carried forward and added to the resit exam mark with the same weighting as listed above.


Exams
Exam typeExam duration% of formal assessment
Standard exam (closed essays, MCQs etc)2 hr 30 mins80.00
Total percentage (Assessment Exams)80.00

Normally resits will be assessed by the same methodology as the first attempt, unless otherwise stated

Reading list

The reading list is available from the Library website

Last updated: 20/03/2018

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